{"id":1106,"date":"2024-08-03T17:06:52","date_gmt":"2024-08-03T21:06:52","guid":{"rendered":"https:\/\/sites.rochester.edu\/biomedical-spectroscopy\/?page_id=1106"},"modified":"2024-08-03T22:29:42","modified_gmt":"2024-08-04T02:29:42","slug":"publications","status":"publish","type":"page","link":"https:\/\/sites.rochester.edu\/biomedical-spectroscopy\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p>Full list of Andrew Berger&#8217;s publications, 1995-present:<\/p>\n<p><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/myncbi\/andrew.berger.1\/bibliography\/public\/\" target=\"_blank\" rel=\"noopener\">https:\/\/www.ncbi.nlm.nih.gov\/myncbi\/andrew.berger.1\/bibliography\/public\/<\/a><\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Full list of Andrew Berger&#8217;s publications, 1995-present: https:\/\/www.ncbi.nlm.nih.gov\/myncbi\/andrew.berger.1\/bibliography\/public\/ &nbsp;<\/p>\n","protected":false},"author":26,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":"","_members_access_role":[],"_members_access_error":""},"class_list":["post-1106","page","type-page","status-publish","hentry"],"acf":{"lead_in":"","display_title":"","subtitle":"","call_to_action":"","hero_image_placement":"no_image","hero_media":"images","hero_pattern_option":"","hero_video":"","hero_image_landing":"","hero_image_landing_two":"","hero_image_landing_three":"","content_modules":[{"acf_fc_layout":"text","anchor":"","css_class":"","title":"Lists for the largest subtopics in the BSL group over the years","content":"<em>Raman spectroscopy of bone (murine and human, ex vivo and in vivo)<\/em>\r\n<ul>\r\n \t<li>\r\n<p class=\"weight-normal\"><span class=\"authors\">Massie C, Knapp E, Awad HA, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/37924650\/\" target=\"_blank\" rel=\"noopener\">Detection of osteoporotic-related bone changes and prediction of distal radius strength using Raman spectra from excised human cadaver finger bones.\u00a0<\/a><span class=\"source\">J Biomech<\/span>.\u00a0<span class=\"pubdate\">2023 Dec;<\/span><span class=\"volume\">161<\/span><span class=\"pages\">:111852<\/span>.\u00a0<span class=\"doi\">doi: 10.1016\/j.jbiomech.2023.111852.\u00a0<\/span><span class=\"pubstatus\">Epub 2023 Oct 25.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 37924650<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC10872783<\/span>.<\/p>\r\n<\/li>\r\n \t<li><span class=\"authors\">Massie C, Chen K, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/34596460\/\" target=\"_blank\" rel=\"noopener\">Calibration Technique for Suppressing Residual Etalon Artifacts in Slit-Averaged Raman Spectroscopy.\u00a0<\/a><span class=\"source\">Appl Spectrosc<\/span>.\u00a0<span class=\"pubdate\">2022 Feb;<\/span><span class=\"volume\">76<\/span><span class=\"issue\">(2)<\/span><span class=\"pages\">:255-261<\/span>.\u00a0<span class=\"doi\">doi: 10.1177\/00037028211046643.\u00a0<\/span><span class=\"pubstatus\">Epub 2021 Oct 1.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 34596460<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC8831449<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Massie C, Knapp E, Chen K, Berger AJ, Awad HA.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/33485148\/\">Improved prediction of femoral fracture toughness in mice by combining standard medical imaging with Raman spectroscopy.\u00a0<\/a><span class=\"source\">J Biomech<\/span>.\u00a0<span class=\"pubdate\">2021 Feb 12;<\/span><span class=\"volume\">116<\/span><span class=\"pages\">:110243<\/span>.\u00a0<span class=\"doi\">doi: 10.1016\/j.jbiomech.2021.110243.\u00a0<\/span><span class=\"pubstatus\">Epub 2021 Jan 13.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 33485148<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC8592058<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Chen K, Massie C, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/32749067\/\">Soft-tissue spectral subtraction improves transcutaneous Raman estimates of murine bone strength in vivo.\u00a0<\/a><span class=\"source\">J Biophotonics<\/span>.\u00a0<span class=\"pubdate\">2020 Nov;<\/span><span class=\"volume\">13<\/span><span class=\"issue\">(11)<\/span><span class=\"pages\">:e202000256<\/span>.\u00a0<span class=\"doi\">doi: 10.1002\/jbio.202000256.\u00a0<\/span><span class=\"pubstatus\">Epub 2020 Aug 31.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 32749067<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC8320303<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Shu C, Chen K, Lynch M, Maher JR, Awad HA, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/30319902\/\">Spatially offset Raman spectroscopy for in vivo bone strength prediction.\u00a0<\/a><span class=\"source\">Biomed Opt Express<\/span>.\u00a0<span class=\"pubdate\">2018 Oct 1;<\/span><span class=\"volume\">9<\/span><span class=\"issue\">(10)<\/span><span class=\"pages\">:4781-4791<\/span>.\u00a0<span class=\"doi\">doi: 10.1364\/BOE.9.004781.\u00a0<\/span><span class=\"pubstatus\">eCollection 2018 Oct 1.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 30319902<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC6179397<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Feng G, Ochoa M, Maher JR, Awad HA, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/28464501\/\" target=\"_blank\" rel=\"noopener\">Sensitivity of spatially offset Raman spectroscopy (SORS) to subcortical bone tissue.\u00a0<\/a><span class=\"source\">J Biophotonics<\/span>.\u00a0<span class=\"pubdate\">2017 Aug;<\/span><span class=\"volume\">10<\/span><span class=\"issue\">(8)<\/span><span class=\"pages\">:990-996<\/span>.\u00a0<span class=\"doi\">doi: 10.1002\/jbio.201600317.\u00a0<\/span><span class=\"pubstatus\">Epub 2017 May 2.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 28464501<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC5971662<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Maher JR, Inzana JA, Awad HA, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23817761\/\" target=\"_blank\" rel=\"noopener\">Overconstrained library-based fitting method reveals age- and disease-related differences in transcutaneous Raman spectra of murine bones.\u00a0<\/a><span class=\"source\">J Biomed Opt<\/span>.\u00a0<span class=\"pubdate\">2013 Jul;<\/span><span class=\"volume\">18<\/span><span class=\"issue\">(7)<\/span><span class=\"pages\">:077001<\/span>.\u00a0<span class=\"doi\">doi: 10.1117\/1.JBO.18.7.077001.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 23817761<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC3697032<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Maher JR, Inzana JA, Awad HA, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23817761\/\" target=\"_blank\" rel=\"noopener\">Overconstrained library-based fitting method reveals age- and disease-related differences in transcutaneous Raman spectra of murine bones.\u00a0<\/a><span class=\"source\">J Biomed Opt<\/span>.\u00a0<span class=\"pubdate\">2013 Jul;<\/span><span class=\"volume\">18<\/span><span class=\"issue\">(7)<\/span><span class=\"pages\">:077001<\/span>.\u00a0<span class=\"doi\">doi: 10.1117\/1.JBO.18.7.077001.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 23817761<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC3697032<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Beier EE, Maher JR, Sheu TJ, Cory-Slechta DA, Berger AJ, Zuscik MJ, Puzas JE.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/23086611\/\" target=\"_blank\" rel=\"noopener\">Heavy metal lead exposure, osteoporotic-like phenotype in an animal model, and depression of Wnt signaling.\u00a0<\/a><span class=\"source\">Environ Health Perspect<\/span>.\u00a0<span class=\"pubdate\">2013 Jan;<\/span><span class=\"volume\">121<\/span><span class=\"issue\">(1)<\/span><span class=\"pages\">:97-104<\/span>.\u00a0<span class=\"doi\">doi: 10.1289\/ehp.1205374.\u00a0<\/span><span class=\"pubstatus\">Epub 2012 Oct 19.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 23086611<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC3552813<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Takahata M, Maher JR, Juneja SC, Inzana J, Xing L, Schwarz EM, Berger AJ, Awad HA.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22832945\/\" target=\"_blank\" rel=\"noopener\">Mechanisms of bone fragility in a mouse model of glucocorticoid-treated rheumatoid arthritis: implications for insufficiency fracture risk.\u00a0<\/a><span class=\"source\">Arthritis Rheum<\/span>.\u00a0<span class=\"pubdate\">2012 Nov;<\/span><span class=\"volume\">64<\/span><span class=\"issue\">(11)<\/span><span class=\"pages\">:3649-59<\/span>.\u00a0<span class=\"doi\">doi: 10.1002\/art.34639.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 22832945<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC3678247<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Maher JR, Takahata M, Awad HA, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/21895339\/\">Raman spectroscopy detects deterioration in biomechanical properties of bone in a glucocorticoid-treated mouse model of rheumatoid arthritis.\u00a0<\/a><span class=\"source\">J Biomed Opt<\/span>.\u00a0<span class=\"pubdate\">2011 Aug;<\/span><span class=\"volume\">16<\/span><span class=\"issue\">(8)<\/span><span class=\"pages\">:087012<\/span>.\u00a0<span class=\"doi\">doi: 10.1117\/1.3613933.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 21895339<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC3170399<\/span>.<\/li>\r\n \t<li>\r\n<p class=\"weight-normal\"><span class=\"authors\">Maher JR, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20132599\/\" target=\"_blank\" rel=\"noopener\">Determination of ideal offset for spatially offset Raman spectroscopy.\u00a0<\/a><span class=\"source\">Appl Spectrosc<\/span>.\u00a0<span class=\"pubdate\">2010 Jan;<\/span><span class=\"volume\">64<\/span><span class=\"issue\">(1)<\/span><span class=\"pages\">:61-5<\/span>.\u00a0<span class=\"doi\">doi: 10.1366\/000370210790571936.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 20132599<\/span>.<\/p>\r\n<\/li>\r\n<\/ul>","background_color":"#ffffff","width":"width-medium"},{"acf_fc_layout":"text","anchor":"","css_class":"","title":"","content":"<em>Light-scattering of organelles in single cells:<\/em>\r\n<ul>\r\n \t<li><span class=\"authors\">Dunn KJ, Matlock A, Funkenbusch G, Yaqoob Z, So PTC, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/38404316\/\" target=\"_blank\" rel=\"noopener\">Optical diffraction tomography for assessing single cell models in angular light scattering.\u00a0<\/a><span class=\"source\">Biomed Opt Express<\/span>.\u00a0<span class=\"pubdate\">2024 Feb 1;<\/span><span class=\"volume\">15<\/span><span class=\"issue\">(2)<\/span><span class=\"pages\">:973-990<\/span>.\u00a0<span class=\"doi\">doi: 10.1364\/BOE.512149.\u00a0<\/span><span class=\"pubstatus\">eCollection 2024 Feb 1.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 38404316<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC10890861<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Dunn KJ, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/37564163\/\" target=\"_blank\" rel=\"noopener\">Three-dimensional angular scattering simulations inform analysis of scattering from single cells.\u00a0<\/a><span class=\"source\">J Biomed Opt<\/span>.\u00a0<span class=\"pubdate\">2023 Aug;<\/span><span class=\"volume\">28<\/span><span class=\"issue\">(8)<\/span><span class=\"pages\">:086501<\/span>.\u00a0<span class=\"doi\">doi: 10.1117\/1.JBO.28.8.086501.\u00a0<\/span><span class=\"pubstatus\">Epub 2023 Aug 9.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 37564163<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC10411915<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Dunn KJ, Elias TM, Brown EB, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/36032574\/\" target=\"_blank\" rel=\"noopener\">Matching an immersion medium's refractive index to a cell's cytosol isolates organelle scattering.\u00a0<\/a><span class=\"source\">Biomed Opt Express<\/span>.\u00a0<span class=\"pubdate\">2022 Aug 1;<\/span><span class=\"volume\">13<\/span><span class=\"issue\">(8)<\/span><span class=\"pages\">:4236-4246<\/span>.\u00a0<span class=\"doi\">doi: 10.1364\/BOE.461874.\u00a0<\/span><span class=\"pubstatus\">eCollection 2022 Aug 1.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 36032574<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC9408249<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Draham RL, Dunn KJ, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/33325894\/\" target=\"_blank\" rel=\"noopener\">Phase-sensitive, angle-resolved light-scattering microscopy of single cells.\u00a0<\/a><span class=\"source\">Opt Lett<\/span>.\u00a0<span class=\"pubdate\">2020 Dec 15;<\/span><span class=\"volume\">45<\/span><span class=\"issue\">(24)<\/span><span class=\"pages\">:6775-6778<\/span>.\u00a0<span class=\"doi\">doi: 10.1364\/OL.409345.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 33325894<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Cannaday AE, Sorrells JE, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/31446681\/\" target=\"_blank\" rel=\"noopener\">Angularly resolved, finely sampled elastic scattering measurements of single cells: requirements for robust organelle size extractions.\u00a0<\/a><span class=\"source\">J Biomed Opt<\/span>.\u00a0<span class=\"pubdate\">2019 Aug;<\/span><span class=\"volume\">24<\/span><span class=\"issue\">(8)<\/span><span class=\"pages\">:1-12<\/span>.\u00a0<span class=\"doi\">doi: 10.1117\/1.JBO.24.8.086502.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 31446681<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC6983487<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Shipp DW, Qian R, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/24322123\/\" target=\"_blank\" rel=\"noopener\">Angular-domain scattering interferometry.\u00a0<\/a><span class=\"source\">Opt Lett<\/span>.\u00a0<span class=\"pubdate\">2013 Nov 15;<\/span><span class=\"volume\">38<\/span><span class=\"issue\">(22)<\/span><span class=\"pages\">:4750-3<\/span>.\u00a0<span class=\"doi\">doi: 10.1364\/OL.38.004750.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 24322123<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Smith ZJ, Wang JC, Quataert SA, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20615023\/\" target=\"_blank\" rel=\"noopener\">Integrated Raman and angular scattering microscopy reveals chemical and morphological differences between activated and nonactivated CD8+ T lymphocytes.\u00a0<\/a><span class=\"source\">J Biomed Opt<\/span>.\u00a0<span class=\"pubdate\">2010 May-Jun;<\/span><span class=\"volume\">15<\/span><span class=\"issue\">(3)<\/span><span class=\"pages\">:036021<\/span>.\u00a0<span class=\"doi\">doi: 10.1117\/1.3443794.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 20615023<\/span><span class=\"pmcid\">; PubMed Central PMCID: PMC2903831<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Smith ZJ, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19340098\/\" target=\"_blank\" rel=\"noopener\">Validation of an integrated Raman- and angular-scattering microscopy system on heterogeneous bead mixtures and single human immune cells.\u00a0<\/a><span class=\"source\">Appl Opt<\/span>.\u00a0<span class=\"pubdate\">2009 Apr 1;<\/span><span class=\"volume\">48<\/span><span class=\"issue\">(10)<\/span><span class=\"pages\">:D109-20<\/span>.\u00a0<span class=\"doi\">doi: 10.1364\/ao.48.00d109.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 19340098<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Smith ZJ, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/19405678\/\" target=\"_blank\" rel=\"noopener\">Construction of an integrated Raman- and angular-scattering microscope.\u00a0<\/a><span class=\"source\">Rev Sci Instrum<\/span>.\u00a0<span class=\"pubdate\">2009 Apr;<\/span><span class=\"volume\">80<\/span><span class=\"issue\">(4)<\/span><span class=\"pages\">:044302<\/span>.\u00a0<span class=\"doi\">doi: 10.1063\/1.3124797.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 19405678<\/span>.<\/li>\r\n \t<li><span class=\"authors\">Smith ZJ, Berger AJ.\u00a0<\/span><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/18382527\/\" target=\"_blank\" rel=\"noopener\">Integrated Raman- and angular-scattering microscopy.\u00a0<\/a><span class=\"source\">Opt Lett<\/span>.\u00a0<span class=\"pubdate\">2008 Apr 1;<\/span><span class=\"volume\">33<\/span><span class=\"issue\">(7)<\/span><span class=\"pages\">:714-6<\/span>.\u00a0<span class=\"doi\">doi: 10.1364\/ol.33.000714.\u00a0<\/span><span class=\"pmid\">PubMed PMID: 18382527<\/span>.<\/li>\r\n<\/ul>\r\n&nbsp;","background_color":"#ffffff","width":"width-medium"}]},"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v28.6 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Publications - Biomedical Spectroscopy Lab<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/sites.rochester.edu\/biomedical-spectroscopy\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Publications - Biomedical Spectroscopy Lab\" \/>\n<meta property=\"og:description\" content=\"Full list of Andrew Berger&#8217;s publications, 1995-present: https:\/\/www.ncbi.nlm.nih.gov\/myncbi\/andrew.berger.1\/bibliography\/public\/ &nbsp;\" \/>\n<meta property=\"og:url\" content=\"https:\/\/sites.rochester.edu\/biomedical-spectroscopy\/publications\/\" \/>\n<meta property=\"og:site_name\" content=\"Biomedical Spectroscopy Lab\" \/>\n<meta property=\"article:modified_time\" content=\"2024-08-04T02:29:42+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" 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